CAFE
Computational Analysis of gene Family Evolution
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cafe Directory Reference

Files

file  branch_cutting.cpp
 
file  branch_cutting.h [code]
 
file  cafe.h [code]
 
file  cafe_commands.cpp
 
file  cafe_commands.h [code]
 
file  cafe_family.c
 
file  cafe_main.c
 
file  cafe_report.c
 
file  cafe_shell.c
 Functions corresponding to the commands available in Cafe.
 
file  cafe_shell.h [code]
 
file  cafe_tree.c
 
file  caferror.py
 
file  conditional_distribution.cpp
 
file  conditional_distribution.h [code]
 
file  cross_validator.cpp
 
file  cross_validator.h [code]
 
file  error_model.cpp
 
file  error_model.h [code]
 
file  gene_family.cpp
 
file  gene_family.h [code]
 
file  Globals.cpp
 
file  Globals.h [code]
 
file  lambda.cpp
 
file  lambda.h [code]
 
file  lambdamu.cpp
 
file  lambdamu.h [code]
 
file  likelihood_ratio.cpp
 
file  likelihood_ratio.h [code]
 
file  log_buffer.cpp
 
file  log_buffer.h [code]
 
file  pvalue.cpp
 
file  pvalue.h [code]
 
file  reports.cpp
 
file  reports.h [code]
 
file  simerror.cpp
 
file  simerror.h [code]
 
file  viterbi.cpp
 
file  viterbi.h [code]