cafe_shell.h File Reference

#include <utils.h>
#include <utils_string.h>
#include <family.h>

Go to the source code of this file.

Data Structures
struct	ErrorMeasure

Typedefs
typedef ErrorMeasure *	pErrorMeasure

Enumerations
enum	enumCafeSehll { CAFE_SHELL_EXIT = 10000, CAFE_SHELL_NO_COMMAND }

Functions
void	initialize_k_bd (pCafeTree pcafe, pTree lambda_tree, int num_values, int fixcluster, double *parameters)
void	set_birth_death_probabilities4 (struct probabilities *probs, int num_lambdas, int fix_cluster, int taxa_id, double *parameters)

Typedef Documentation

typedef ErrorMeasure* pErrorMeasure

Enumeration Type Documentation

enum enumCafeSehll

Enumerator
CAFE_SHELL_EXIT
CAFE_SHELL_NO_COMMAND

Function Documentation

void initialize_k_bd	(	pCafeTree	pcafe,
		pTree	lambda_tree,
		int	num_values,
		int	fixcluster,
		double *	parameters
	)

void set_birth_death_probabilities4	(	struct probabilities *	probs,
		int	num_lambdas,
		int	fix_cluster,
		int	taxa_id,
		double *	parameters
	)