branch_cutting.h File Reference

#include <vector>
#include <family.h>

Go to the source code of this file.

Data Structures
class	CutBranch

Typedefs
typedef std::vector < std::vector< double > >	matrix

Functions
void	set_size_for_split (pCafeFamily pcf, int idx, pCafeTree pcafe)
void	cafe_branch_cutting (Globals &globals, viterbi_parameters &viterbi)
void	cut_branch (CutBranch &cb, pTree ptree, pCafeTree paramCafe, family_size_range &range, int num_threads, int num_random_samples, int b, std::ostream &ost)
void	compute_cutpvalues (pCafeTree pparamcafe, pCafeFamily family, int num_random_samples, int b, int range_start, int range_stop, viterbi_parameters &viterbi, double pvalue, std::vector< double > &p1, double **p2, CutBranch &cb)

Typedef Documentation

typedef std::vector<std::vector<double> > matrix

Function Documentation

void cafe_branch_cutting	(	Globals &	globals,
		viterbi_parameters &	viterbi
	)

void compute_cutpvalues	(	pCafeTree	pparamcafe,
		pCafeFamily	family,
		int	num_random_samples,
		int	b,
		int	range_start,
		int	range_stop,
		viterbi_parameters &	viterbi,
		double	pvalue,
		std::vector< double > &	p1,
		double **	p2,
		CutBranch &	cb
	)

void cut_branch	(	CutBranch &	cb,
		pTree	ptree,
		pCafeTree	paramCafe,
		family_size_range &	range,
		int	num_threads,
		int	num_random_samples,
		int	b,
		std::ostream &	ost
	)

void set_size_for_split	(	pCafeFamily	pcf,
		int	idx,
		pCafeTree	pcafe
	)