error_model_tests.cpp File Reference

#include <sstream>
#include <vector>
#include <fstream>
#include <iostream>
#include <error_model.h>
#include <gene_family.h>
#include "cafe_commands.h"
#include <cafe.h>
#include "CppUTest/TestHarness.h"

Functions
	TEST_GROUP (ErrorModel)
	TEST (ErrorModel, get_error_model)
	TEST (ErrorModel, error_model_write)
	TEST (ErrorModel, error_model_read)
	TEST (ErrorModel, ErrorStruct_read_maxfamilysize_should_not_shrink)
	TEST (ErrorModel, add_and_remove_error_model)
	TEST (ErrorModel, read_freq_from_measures_errors)
	TEST (ErrorModel, read_freq_from_measures_file_mismatch)
	TEST (ErrorModel, read_freq_from_measures_column_mismatch)
	TEST (ErrorModel, read_freq_from_measures)
	TEST (ErrorModel, read_freq_from_measures_arg_is_max)
	TEST (ErrorModel, read_freq_from_measures_second_file_optional)
	TEST (ErrorModel, read_error_double_measure)
	TEST (ErrorModel, read_error_double_measure_errors)
	TEST (ErrorModel, estimate_error_double_measure)
	TEST (ErrorModel, get_size_probability_distribution)

Function Documentation

TEST	(	ErrorModel	,
		get_error_model
	)

TEST	(	ErrorModel	,
		error_model_write
	)

TEST	(	ErrorModel	,
		error_model_read
	)

TEST	(	ErrorModel	,
		ErrorStruct_read_maxfamilysize_should_not_shrink
	)

TEST	(	ErrorModel	,
		add_and_remove_error_model
	)

TEST	(	ErrorModel	,
		read_freq_from_measures_errors
	)

TEST	(	ErrorModel	,
		read_freq_from_measures_file_mismatch
	)

TEST	(	ErrorModel	,
		read_freq_from_measures_column_mismatch
	)

TEST	(	ErrorModel	,
		read_freq_from_measures
	)

TEST	(	ErrorModel	,
		read_freq_from_measures_arg_is_max
	)

TEST	(	ErrorModel	,
		read_freq_from_measures_second_file_optional
	)

TEST	(	ErrorModel	,
		read_error_double_measure
	)

TEST	(	ErrorModel	,
		read_error_double_measure_errors
	)

TEST	(	ErrorModel	,
		estimate_error_double_measure
	)

TEST	(	ErrorModel	,
		get_size_probability_distribution
	)

TEST_GROUP

(

ErrorModel

)